PUBLICATIONS SCIENTIFIQUES - SCIENTIFIC PUBLICATIONS

La plupart des articles ci-dessous peuvent être téléchargés en cliquant directement sur le lien ou commandés en me contactant directement par courriel. Les articles ayant trait à la plongée sous-marine sont consultables en cliquant ici. L'ensemble des autres articles de l'équipe Dynamique et Evolution des COmmunautés Phytoplanctoniques (<2002), rebaptisé l'Equipe d'Ecologie Microbienne Aquatique (2002-2008) et qui est aujourd'hui l'équipe Biodiversité, Fonctionnement et Evolution des Ecosystèmes Lacustres (BioFEEL) est consultable en cliquant sur le lien marqué ci-dessus.

1. Marie, D., F. Partensky, S. Jacquet and D. Vaulot. 1997. Enumeration and cell cycle analysis of natural populations of marine picoplankton by flow cytometry using the nucleic acid strain SYBR Green I. Appl. Environ. Microbiol. 63:186-193
2. Jacquet, S., J.-F. Lennon and D. Vaulot. 1998. Application of a compact automatic sea water sampler to high frequency picoplankton studies. Aquat. Microb. Ecol. 14:309-314
3. Jacquet, S., J.-F. Lennon, D. Marie and D. Vaulot. 1998. Picoplankton population dynamics in coastal waters of the NW Mediterranean Sea. Limnol. Oceanogr. 43:1916-1931
4. Christaki, U., S. Jacquet, J. R. Dolan, D. Vaulot and F. Rassoulzadegan. 1999. Growth and grazing on Prochlorococcus and Synechococcus by two marine flagellates. Limnol. Oceanogr. 44:52-62
5. Jacquet, S. and J.-F. Lennon. 1999. Dynamique haute fréquence des populations picoplanctoniques marines. J. Rech. Océanogr. 24:77-86
6. Holtzendorff, J., F. Partensky, S. Jacquet, F. Bruyant, D. Marie, L. Garczarek, I. Mary, D. Vaulot and W. R. Hess. 2001. Diel expression of cell cycle-related genes in synchronized cultures of Prochlorococcus sp. strain PCC 9511. J. Bact. 183:915-920
7. Jacquet, S., F. Partensky, D. Marie, R. Casotti and D. Vaulot. 2001. Cell cycle regulation by light in Prochlorococcus strains. Appl. Environ. Microbiol. 67:782-790
8. Jacquet, S., F. Partensky, J.-F. Lennon and D. Vaulot. 2001. Diel patterns of growth and division in marine picoplankton in culture. J. Phycol. 37:357-369
9. Guillou, L., S. Jacquet, M.-J. Chrétiennot-Dinet. 2001. Grazing impact of two small heterotrophic flagellates on Prochlorococcus and Synechococcus. Aquat. Microb. Ecol. 26:201-207
10. Jacquet, S. 2001. La variabilité physiologique et numérique du picophytoplancton marin à petite échelle de temps. J. Rech. Oceanogr. 26:61-72
11. Jacquet, S., H. Havskum, F. T. Thingstad and D. Vaulot. 2002. Effects of inorganic and organic nutrient enrichment on a coastal microbial community (Isefjord, Denmark). Mar. Ecol. Progr. Ser. 228:3-14
12. Jacquet, S., M. Heldal, D. Iglesias-Rodriguez, A. Larsen, W. Wilson and G. Bratbak. 2002. Flow cytometric analysis of an Emiliana huxleyii bloom terminated by viral infection. Aquat. Microb. Ecol. 27:111-124
13. Jacquet, S., L. Prieur, C. Avois-Jacquet, J.-F. Lennon and D. Vaulot. 2002. Short-timescale variability of picophytoplankton abundance and cellular parameters in surface waters of the Alboran Sea (western Mediterranean). J. Plank. Res. 24:639-655
14. Leboulanger, C., U. Dorigo, S. Jacquet, B. LeBerre, G. Paolini and J.-F. Humbert. 2002. Application of a submersible spectrofluorometer for rapid monitoring of freshwater cyanobacterial blooms: a case study. Aquat. Microb. Ecol. 30:83-89
15. Evans, C., S. D. Archer, S. Jacquet and W. H. Wilson. 2003. Direct estimates of the contribution of viral lysis and microzooplankton grazing to the decline of a Micromonas spp. population. Aquat. Microb. Ecol. 30:207-219
16. Jacquet, S. and G. Bratbak. 2003. Effects of ultraviolet radiation on marine virus-phytoplankton interactions. FEMS Microb. Ecol. 1511:1-11
17. Briand, J.-F., S. Jacquet, C. Bernard and J.-F. Humbert. 2003. Health hazards for terrestrial vertebrates from toxic cyanobacteria in surface water ecosystems. Review article. Vet. Res. 34:361-378
18. Muller, F., S. Jacquet and W. H. Wilson. 2003. Biological factors regulating the chemical speciation of Cu, Zn, and Mn under different nutrient regimes in a marine mesocosm experiment. Limnol. Oceanogr. 48: 2289-2302
19. Larsen, A., G. A. F. Flaten, R. A. Sandaa, T. Castberg, R. Thyrhaug, S. R. Erga, S. Jacquet and G. Bratbak. 2004. Spring phytoplankton bloom dynamics in Norwegian coastal waters: Microbial community succession and diversity. Limnol. Oceanogr. 49:180-190
20. Engel, A., B. Delille, S. Jacquet, U. Riebesell, E. Rochelle-Newall, A. Terbrüggen and I. Zondervan. 2004. TEP and DOC production by Emiliana huxleyi exposed to different CO2 concentrations: A mesocosm experiment. Aquat. Microb. Ecol. 34:1-13
21. Dorigo, U., S. Jacquet and J.-F. Humbert. 2004. Cyanophage diversity, inferred from g20 gene analyses, in the largest natural lake in France, Lake Bourget. Appl. Environ. Microbiol. 70: 1017-1022
22. Rochelle-Newall, E., B. Delillie, M. Frankignoulle, J.-P. Gattuso, S. Jacquet, U. Riebesell, A. Terbruggen and I. Zondervan. 2004. Chromophoric dissolved organic matter in experimental mesocosms maintained under different pCO2 levels. Mar. Ecol. Progr. Ser. 272:25-31
23. Havskum, H., L. Schlüter, R. Scharek, E. Berdalet and S. Jacquet. 2004. Routine quantification of phytoplankton groups : microscopy or pigment analyses. Mar. Ecol. Progr. Ser. 273:31-42
24. Jacquet, S., I. Domaizon, S. Personnic, S. Duhamel, M. Heldal, A. S. Pradeep Ram and T. Sime-Ngando. 2005. Estimates of protozoan and virus-mediated mortality of bacterioplankton in Lake Bourget (France). Fresh. Biol. 50:627-645
25. Jacquet, S., J.-F. Briand, C. Leboulanger, C. Avois-Jacquet, L. Oberhaus, B. Tassin, B. Vinçon-Leite, G. Paolini, J.-C. Druart, O. Anneville and J.-F. Humbert. 2005. The proliferation of the toxic cyanobacterium Planktothrix rubescens following restoration of the largest natural French lake (Lac du Bourget). Harmful Algae 4:651-672
26. Delille, B., J. Harlay, I. Zondervan,S. Jacquet, L. Chou, R. Wollast, M. Frankignoulle, A. Vieria Borges, U. Riebesell and J.-P. Gattuso. 2005. Response of primary production and calcification to changes of pCO2 during experimental blooms of the coccolithophorid Emiliana huxleyi. Global Biogeochemical Cycles 19 (2023):1-14
27. Engel, A., I. Zondervan, K. Aerts, A. Benthien, L. Chou, B. Delille, J.-P. Gattuso, J. Harlay, C. Heemann, L. Hoffmann, S. Jacquet, J. Nejstraard, M.-D. Pizay, E. Rochelle-Newall, U. Schneider; A. Terbrueggen and U. Riebesell. 2005. Testing the direct effect of CO2 conentration on a bloom of the coccolithophorid Emiliana huxleyi in mesocosm experiments. Limnol. Oceanogr. 50:493-507
28. Briand, J.-F., S. Jacquet, C. Flinois, C. Avois-Jacquet, C. Maisonnette, B. Leberre, and J.-F. Humbert. 2005. Variations in the microcystins production of Planktothrix rubescens (cyanobacteria) assessed by a four-years in situ survey of Lac du Bourget (France) and by laboratory experiments. Micro. Ecol. 50:418-428
29. Jardillier, L., D. Boucher, S. Personnic, S. Jacquet, A. Thénot, D. Sargos, C. Amblard and D. Debroas. 2005. Relative importance of nutrients and mortality factors on prokaryortic community composition in two lakes of different trophic status: microcosm experiments. FEMS Microb. Ecol. 53:429-443
30. Duhamel, S. and S. Jacquet. 2006. Flow cytometric analysis of bacteria and virus-like particles in lakes. J. Microbiol. Methods 64:316-322
31. Duhamel, S., I. Domaizon, S. Personnic and S. Jacquet. 2006. Assessing the microbial community dynamics and the role of bacteriophages as mortality agents in Lake Geneva. J. Water Sci. 19:115-126
32. Comte, J, S. Jacquet, S. Viboud, D. Fontvieille, G. Paolini and I. Domaizon. 2006. Microbial community structure and dynamics in the largest natural French lake (Lake Bourget, February to July 2002). Microb. Ecol. 52:72-89
33. Thingstad, T. F., H Havskum, U. L. Zweifel, E. Berdalet, M. Montserrat Sala, F. Peters, M. Alcaraz, R. Scharek, M. Perez, S. Jacquet, G. A. Fonnes Flaten, J. R. Dolan, C. Marrasé, F. Rassoulzadegan, A. Hagstrøm and D. Vaulot. 2007. Ability of a "minimum" microbial food web model to reproduce response patterns observed in mesocosms manipulated with N and P, glucose, and Si. J. Mar. Syst. 64:15-34
34. Jacquet, S., I. Domaizon, S. Personnic and T. Sime-Ngando. Do small grazers influence viral-induced bacterial mortality in Lake Bourget ? Fund. Appl. Limnol. 170: 125-132
35. Oberhaus, L., J.-F. Briand, C. Leboulanger, S. Jacquet and J.-F. Humbert. 2007. Comparative effects of the quality and quantity of light and temperature on the growth of Planktothrix agardhii and P. rubescens. J. Phycol. 43:1191-1199
36. Danovaro, R., C. Corinaldesi, M. Filippini, U. Fischer, M. O. Gessner, S. Jacquet, M. Magagnini and B. Velimirov. 2008. Viriobenthos in fresh water and marine sediments: a review. Fresh. Biol. 53:1186-1213
37. Sime-Ngando, T., J. Colombet, S. Personnic, I. Domaizon, U. Dorigo, P. Perney, J.-C Hustache, E. Viollier and S. Jacquet. 2008. Short-term variations in abundances and potential activities of viruses, bacteria and nanoprotists in Lake Bourget (France). Ecol. Res. 23:851-861
38. Middelboe, M., S. Jacquet and M. Weinbauer. 2008. Viruses in freshwater ecosystems: an introduction to the exploration of viruses in new aquatic habitats. Fresh. Biol. 53:1069-1075
39. Miki, T. and S. Jacquet.2008. REVIEW. Complex interactions in the microbial world: under-explored key links between viruses, bacteria and protozoan grazers in aquatic environments. Aquat. Microb. Ecol. 51:195-208
40. Jacquet, S..2009. Obituary: Bernard Dussart (1922-2008). J. Plank. Res. 31:345-348
41. Cellamare, M., A. Rolland and S. Jacquet. 2009. Flow cytometry sorting of freshwater phytoplankton. J. Appl. Phycol.
42. Personnic, S., I. Domaizon, U. Dorigo, L. Berdjeb and S. Jacquet. 2009. Seasonal and spatial variability of virio-, bacterio- and picophytoplankton in three peri-alpine lakes. Hydrobiol. 627:99-116
43. Personnic, S., I. Domaizon, T. Sime-Ngando and S. Jacquet. 2009. Seasonal variations of microbial abundances and virus- versus flagellate-induced mortality of picoplankton in three peri-alpine lakes. J. Plank. Res. 31:1161-1177.
44. Rolland, A., M. Maury, F. Bertrand and S. Jacquet. 2009. Assessing phytoplankton structure and seasonal dyanmics in a freshwater ecosystem using a new and powerful multitable statistical analysis. Wat. Res. 43:3155-3168
45. Berdjeb, L. et S. Jacquet. 2009. La viriosphère : quelle place dans le fonctionnement et l'évolution des écosystèmes aquatiques. Partie 1 ?Virologie 13:133-143.
46. Berdjeb, L. et S. Jacquet. 2009. La viriosphère : quelle place dans le fonctionnement et l'évolution des écosystèmes aquatiques. Partie 2 ?Virologie ???
47. Miki, T. and S. Jacquet. Indirect interactions in the microbial world: specificities and similarities to plan-insect systems. Pop. Ecol. (accepted)
48. Cellamare, M., A. Rolland and S. Jacquet. Flow cytometric sorting of freshwater phytoplankton. J. Appl. Phycol (accepted)

Articles soumis et en révision - Articles submitted or in revision

• Bratbak, G., S. Jacquet, A. Larsen, L. Petterson, A. F. Sazhin and R. Thyrhaug. The plankton community in Norwegian coastal waters and Skagerrak - abundance, composition, spatial distribution and diel variation. Limnology & Oceanography
• Bryhn, A. C., C. Girel, G. Paolini and S. Jacquet. Reconstructing historical phosphorus loadings and predicting future effects from nutrient abatment and climate change on P concentrations in the largest natural French lake. Ecology Modeling
• Cellamare, M. and S. Jacquet. Structure and dynamics of pico-, nano- and microphytoplankton in three large and deep alpine lakes of different trophic status. Freshwater Biology
• Jacquet, S., D. Marie, L. Prieur and D. Vaulot. Structure and variability of the microbial community associated to the Alboran Sea frontal system (Western Mediterranean) in winter. Journal of Oceanographic Research and Data
• Rolland, A., F. Rimet and S. Jacquet. A 2-year phytoplanktonic survey in the Reservoir Marne (France): A case study validating the use of a spectrofluorometer by comparison to algal taxonomy and chla measurements. Knowledge and Monitoring of Aquatic Ecosystems
• Thomas, R., L. Berdjeb, T. Sime-Ngando and S. Jacquet. Viral abundance, production, decay rates and life strategies (lytic vs. lysogeny) in Lake Bourget. Environmental Microbiology

Articles en préparation - Forthcoming articles

• Berdjeb, L., I. Domaizon and S. Jacquet. Impact of viruses on bacterial diversity and nutrient dynamics in peri-alpine lakes.
• Berdjeb, L., I. Domaizon, M. H. Gourdon and S. Jacquet. Do prokaryotes and viruses co-vary in peri-alpine lakes?
• Bettarel, Y. and 7 co-authors. Virus-bacteria interactions along a salinity gradient, Senegal.
• Bouvier, T. and 9 co-authors. Relative importance of virus-induced mortality on bacterioplankton diversity compare to UV exposure and temperature increase.
• Domaizon, I., U. Dorigo, S. Personnic, J. Comte, A. Mbade Sene, A. Millery and S. Jacquet. Assessment of protozoan predation impact on aquatic bacteria: in situ experimental approaches.
• Filippini, M., S. Jacquet, I. Domaizon, J. Colombet, T. Sime-Ngando and M. O. Gessner. Effects of elevated temperature and nutrient enrichment on dynamics of freshwater viruses and bacteria.
• Jacquet, S, J.-C. Druart, O. Anneville, N. Gallina and J. Lazzaroto. Structure and dynamics of cyanobacteria in Lake Geneva: a 33-year survey.
• Jacquet, S. , T. Sime-Ngando, U. Dorigo, A. Millard, B. Leberre, J. Lepault and B. Delmas. A new virus infecting PE-rich freshwater picocyanobacteria.
• Jacquet, S. Lake Bourget : A 25 years limnological story.

Divers (vulgarisation, prix, intervention)

1. Prix de l'Union des Océanographes de France décerné à Stéphan Jacquet, mars 1999, Marseille
2. Prix Bretagne jeune chercheur 2001, mention spéciale décerné à Stéphan Jacquet, décembre 2001, Brest
3. Jacquet, S. 2001. Virus aquatiques: des tueurs très utiles. Biofutur 213:57-61
4. La Recherche 2002. Picophage: le plus petit prédateur connu. La Recherche 349:20-21
5. Sciences Ouest 2002. Le picophage, un maillon clé dans le cycle du CO2. Sciences ouest 186:10
6. Duhamel, S., S. Personnic et S. Jacquet. 2004. Importance des virus en milieu lacustre. INRA mensuel 122:8-9
7. Le Point. 2005. Les docteurs du lac. Spécial "Thonon-les-Bains". Le Point n° 1687
8. Personnic, S., S. Duhamel, Y. Bettarel, T. Sime-Ngando et S. Jacquet. 2006. Les virus planctoniques: un compartiment biologique clé des écosystèmes aquatiques. Le Courrier de l'Environnement de l'INRA 53:19-34
9. Le Dauphine libéré. 2007. Prolifération d'une cyanobactérie au Léman. Article soumis. Article publié dans la presse.
10. Personnic, S. and S. Jacquet. 2007. Les virus : chefs d'orchestre aquatiques. La Recherche 407:50-53
11. Jacquet, S. et S. Personnic. 2007. Les virus : chefs d'orchestre aquatiques. Les Dossiers de la Recherche 28:29-33
12. Jacquet, S.. 2007. A propos de la corne du narval. Géo n°343 p6
13. Radio Suisse Romande. 2007. Emission "Impatience" sur les virus (mercredi 26 sept 2007). Interview (Podcast)
14. Jacquet, S. 2008. Portrait d'un limnologue : Bernard Dussart (1922-...). Mémoires et Documents publiés par l' Académie Chablaisienne, pp 99-134
15. Rolland, A. et S. Jacquet. 2009. Classification de l'état écologique du réservoir Marne via l'utilisation de 3 métriques: Chlorophylle a, Indice planctonique lacustre et Phosphore total. Hydroécologie appliquée (sous presse)
16. Jacquet, S.. 2010. Portrait d'un limnologue: Gérard Balvay (1941-...). Mémoires et Documents publiés par l' Académie Chablaisienne (accepté)
17. Jacquet, S., N. Gallina et O. Anneville. 2010. Impact potentiel ou avéré des changements climatiques sur le développement des cyanobactéries dans le Léman. Ouvrage collectif en fin de préparation (Editeur D Gerdeaux)
18. Jacquet, S., I. Domaizon, S. Masquelier, C. Lepère, L. Guillou, A. Chambouvet, D. Debroas et T. Sime-Ngando. 2010. Parasites du phytoplancton: anges ou démons ? Le Courrier de l'Environnement (en révision)
19. Jacquet, S. L'histoire de la Station INRA d'Hydrobiologie Lacustre de Thonon-les-Bains. Mémoire (en préparation)
    
    

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    Cette page a été actualisée en novembre 2009 - Last update on November, 2009